Website and data research by 101Leafy.
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Bottom of the Well (Master Quest)
Where the Gold Skulltulas, chests, and doors of Bottom of the Well would be in Master Quest, next to the normal ones. Master Quest is not playable in the Nintendo Switch 2 remake yet. 101Leafy researched the game. Bottom of the Well
Gold Skulltula 3 / 3
Chest 5 / 12
Doors 9 / 9- Chained doors 2 / 2
Each cell reads Master Quest / Normal.

The pins sit on the normal dungeon map. Spots outside its rooms show where the Master Quest rooms differ.
By floor
| B2 | 1 / 0 | 2 / 2 | 1 / 1 |
| B1 | 2 / 3 | 3 / 10 | 8 / 8 |